3species (5) BLAST (1) CEABiGR (10) E5 (5) RemoteSensing (1) WGCNA (5) analysis (6) august (1) communication (2) daily (4) download (1) e5 (1) goals (11) heat (1) lncRNA (4) milestones (1) pipeline (1) planning (2) popgen (1) proposal (1) review (1) stress (1) to-do (1) workflow (2)

 3species (5)

E5 3 Species 05 - P. meandrina and P. evermanni lncRNA Discovery
E5 3 Species 04 - Pocillopora Mapping Comparison
E5 3 Species 03 - Pocillopora Mapping
E5 3 Species 02 - Porites Mapping
E5 3 Species 01 - A pulchra lncRNA Discovery

 BLAST (1)

E5 Descriptive lncRNA Content - BLASTs and Venn Diagram

 CEABiGR (10)

05 - WGCNA - CEABiGR WGCNA Settings with male lncRNAs
04 - WGCNA - CEABiGR male lncRNAs
03 - WGCNA - CEABiGR lncRNA
02 - Differential Expression - CEABiGR mRNA
01 - Differential Expression - CEABiGR lncRNA
00 - Size Distribution - CEABiGR lncRNA
CEABiGR lncRNA - WGCNA-01
CEABiGR lncRNA - WGCNA-00
CEABiGR lncRNA - RNAcentral BLASTn
CEABiGR lncRNA - DESeq2 Runs

 E5 (5)

E5 3 Species 05 - P. meandrina and P. evermanni lncRNA Discovery
E5 3 Species 04 - Pocillopora Mapping Comparison
E5 3 Species 03 - Pocillopora Mapping
E5 3 Species 02 - Porites Mapping
E5 3 Species 01 - A pulchra lncRNA Discovery

 RemoteSensing (1)

Google Earth Engine and the ORCAA Tool for Aquatic Remote Sensing of Environmental Parameters

 WGCNA (5)

05 - WGCNA - CEABiGR WGCNA Settings with male lncRNAs
04 - WGCNA - CEABiGR male lncRNAs
03 - WGCNA - CEABiGR lncRNA
CEABiGR lncRNA - WGCNA-01
CEABiGR lncRNA - WGCNA-00

 analysis (6)

lncRNA Discovery Workflow Scale-up
LncRNA Discovery Workflow
Merging Kallisto Abundance Data into Count Matrix
DESeq2 Differential Expression Analysis Pipeline
CEABiGR Kallisto Run for lncRNA Count Matrix
LncPipe Workflow

 august (1)

August 2022 Goals

 communication (2)

Mussel Heat Stress Analysis
NSA Meeting Poster Presenation

 daily (4)

2024 May Goals
2024 Winter Daily Bits
2023 February Daily Bits
2023 January Daily Bits

 download (1)

10.10.24 rclone for Google Drive

 e5 (1)

00 - Status - e5 3 Species lncRNA Comparative

 goals (11)

WIN 24 Week 06 Goals
WIN 24 Week 04 Goals
WIN 24 Week 03 Goals
WIN 24 Week 02 Goals
2023 February Goals
Week of 01/17/2023 To-do List
2023 January Goals
2022 November Goals
June 2022 Goals
February Goals
November Goals

 heat (1)

Mussel Heat Stress

 lncRNA (4)

E5 Descriptive lncRNA Content - BLASTs and Venn Diagram
lncRNA Discovery Workflow Scale-up
CEABiGR Kallisto Run for lncRNA Count Matrix
LncPipe Workflow

 milestones (1)

Bypass and Progress Planning

 pipeline (1)

LncRNA Discovery Workflow

 planning (2)

10.25.24 Revisted Master Plan
Bypass and Progress Planning

 popgen (1)

10.10.24 rclone for Google Drive

 proposal (1)

1st Committee Meeting

 review (1)

Coral Gene Expression/DNA Methylation Lit Review

 stress (1)

Mussel Heat Stress

 to-do (1)

NSF International Research Experience for Students

 workflow (2)

lncRNA in Express Compare Data
lncRNA in Express Compare Data